Gene Expression
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Varmole: a biologically drop-connect deep neural network model for prioritizing disease risk variants and genes
Article Year: 2020
Compression of quantification uncertainty for scRNA-seq counts
Article Year: 2021
Transposon-induced inversions activate gene expression in the maize pericarp
Article Year: 2021
Ultra-fast scalable estimation of single-cell differentiation potency from scRNA-Seq data
Article Year: 2020
Inferring TF activities and activity regulators from gene expression data with constraints from TF perturbation data
Article Year: 2020
Swan: a library for the analysis and visualization of long-read transcriptomes
Article Year: 2020
ECMarker: interpretable machine learning model identifies gene expression biomarkers predicting clinical outcomes and reveals molecular mechanisms of human disease in early stages
Article Year: 2020
ILoReg: a tool for high-resolution cell population identification from single-cell RNA-seq data
Article Year: 2020
FastBMD: an online tool for rapid benchmark dose–response analysis of transcriptomics data
Article Year: 2020
Some theoretical aspects of reprogramming the standard genetic code
Article Year: 2021
The optimal discovery procedure for significance analysis of general gene expression studies
Article Year: 2020
FuSe: a tool to move RNA-Seq analyses from chromosomal/gene loci to functional grouping of mRNA transcripts
Article Year: 2020
DysRegSig: an R package for identifying gene dysregulations and building mechanistic signatures in cancer
Article Year: 2020
ProteomeExpert: a Docker image-based web server for exploring, modeling, visualizing and mining quantitative proteomic datasets
Article Year: 2021
MCPeSe: Monte Carlo penalty selection for graphical lasso
Article Year: 2020
selectBoost: a general algorithm to enhance the performance of variable selection methods
Article Year: 2020
Normalization of single-cell RNA-seq counts by log(x + 1)† or log(1 + x)†
Article Year: 2021
Extensive proteomic and transcriptomic changes quench the TCR/CD3 activation signal of latently HIV-1 infected T cells
Article Year: 2021
A rare coding mutation in the MAST2 gene causes venous thrombosis in a French family with unexplained thrombophilia: The Breizh MAST2 Arg89Gln variant
Article Year: 2021
A regulatory sub-circuit downstream of Wnt signaling controls developmental transitions in neural crest formation
Article Year: 2021